STRINGSTRING
Phatr40163 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr40163" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr40163Predicted protein (371 aa)    
Predicted Functional Partners:
Phatr37086
Predicted protein (226 aa)
     
 
  0.957
Phatr33864
Predicted protein (465 aa)
     
 
  0.957
Phatr48664
Predicted protein (504 aa)
     
 
  0.949
Phatr52110
Putative uncharacterized protein (427 aa)
         
    0.900
Phatr10398
Uridine kinase (209 aa)
 
            0.626
Phatr46453
Predicted protein (438 aa)
     
 
  0.600
ACC2
Biotin carboxylase (2282 aa)
         
  0.459
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
     
   
  0.444
Phatr24739
Predicted protein (1594 aa)
     
   
  0.444
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (9%) [HD]