STRINGSTRING
Phatr40261 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr40261" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr40261Predicted protein (311 aa)    
Predicted Functional Partners:
Phatr47293
Predicted protein (580 aa)
       
    0.589
Phatr9794
Predicted protein (404 aa)
         
  0.547
Phatr12431
Predicted protein (801 aa)
         
  0.522
Phatr43773
Predicted protein (398 aa)
       
 
  0.478
Phatr30578
Predicted protein (352 aa)
         
  0.477
Phatr8663
Predicted protein (187 aa)
     
  0.475
Phatr9619
Predicted protein (408 aa)
   
   
  0.467
Phatr14125
Monogalactosyldiacylglycerol synthase (394 aa)
   
   
  0.467
Phatr34441
Predicted protein (286 aa)
     
 
  0.464
ELO6b_2
Elongase delta 6 elongase (278 aa)
       
 
  0.463
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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