STRINGSTRING
Phatr40573 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr40573" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr40573Predicted protein (675 aa)    
Predicted Functional Partners:
Phatr55230
Predicted protein (709 aa)
   
  0.788
HSP90
Heat shock protein Hsp90 (780 aa)
   
  0.788
Phatr18793
Predicted protein (750 aa)
   
  0.788
APC10
Predicted protein (148 aa)
     
  0.766
APC2
Predicted protein (767 aa)
     
  0.763
Phatr46600
Predicted protein (459 aa)
     
  0.761
APC6
Predicted protein (381 aa)
       
  0.761
APC8
Predicted protein (648 aa)
       
  0.759
Phatr44561
Predicted protein (439 aa)
       
  0.755
Phatr32412
Annotation not available (800 aa)
     
  0.747
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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