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Phatr40691 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr40691" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr40691Predicted protein (216 aa)    
Predicted Functional Partners:
Phatr13154
Predicted protein (885 aa)
 
   
  0.702
Phatr12925
Predicted protein (255 aa)
   
   
  0.700
Phatr8155
Predicted protein (102 aa)
 
   
  0.699
Phatr9046
Predicted protein (163 aa)
   
   
  0.554
Phatr45621
Predicted protein (426 aa)
   
   
  0.518
Phatr54983
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
   
  0.504
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
           
  0.491
Phatr24739
Predicted protein (1594 aa)
           
  0.491
Phatr49508
Predicted protein (317 aa)
   
        0.479
Phatr9538
Predicted protein (593 aa)
   
   
  0.466
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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