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dsCYC8 protein (Phaeodactylum tricornutum) - STRING interaction network
"dsCYC8" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsCYC8Predicted protein (385 aa)    
Predicted Functional Partners:
CYCB2
Predicted protein (64 aa)
           
  0.424
CYCL1
Predicted protein (193 aa)
           
  0.424
CYCP2
Predicted protein (788 aa)
           
  0.424
CYCP4
Predicted protein (585 aa)
           
  0.424
CYCH1
Predicted protein (272 aa)
           
  0.424
CYCD1
Predicted protein (222 aa)
           
  0.424
hCDK5
Predicted protein (378 aa)
           
  0.424
CDKD1
Predicted protein (304 aa)
           
  0.424
CYCP1
Predicted protein (935 aa)
           
  0.420
CDKA1
Predicted protein (290 aa)
           
  0.420
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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