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Phatr41002 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41002" - Predicted protein in Phaeodactylum tricornutum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Phatr41002Predicted protein (475 aa)    
Predicted Functional Partners:
UBA1
Ubiquitin-activating enzyme E1, protein 1 (179 aa)
 
 
  0.579
Phatr7639
Predicted protein (124 aa)
     
 
  0.568
Phatr34373
Predicted protein; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of the sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards URM1. Subsequently, a transient disulfi [...] (418 aa)
 
 
0.454
Phatr20318
Predicted protein (460 aa)
 
 
0.451
Phatr46641
Predicted protein (1036 aa)
       
      0.422
Phatr46105
Predicted protein (485 aa)
       
      0.422
Phatr45663
Predicted protein (356 aa)
       
      0.422
Phatr38946
Predicted protein (495 aa)
       
      0.422
sufS
Cysteine desulfurase for iron-sulfur cluster formation suf (496 aa)
       
      0.422
UBA3
Ubiquitin-activating enzyme E1, protein 3 (462 aa)
 
 
0.412
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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