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STRINGSTRING
Phatr41172 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41172" - Calreticulin in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr41172Calreticulin (390 aa)    
Predicted Functional Partners:
Phatr16786
Predicted protein (716 aa)
     
 
  0.995
Phatr54787
UDP-glucose-glycoprotein glucosyltransferase (166 aa)
     
   
  0.959
HSP70G
Protein heat shock protein; Belongs to the heat shock protein 70 family (901 aa)
     
 
  0.884
Phatr52346
alpha-1,2-Mannosidase; Mannosyl-oligosaccharide alpha-1,2-mannosidase; Belongs to the glycosyl hydrolase 47 family (509 aa)
     
   
  0.849
HSP70A
Protein heat shock protein Hsp70 (653 aa)
     
 
  0.820
Phatr47306
Predicted protein (193 aa)
     
 
  0.811
Phatr44590
Predicted protein (670 aa)
     
 
  0.811
Phatr42566
Predicted protein (220 aa)
     
 
  0.811
Phatr11781
Predicted protein (106 aa)
     
 
  0.811
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
     
   
  0.793
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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