STRINGSTRING
Phatr41210 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41210" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr41210Predicted protein (235 aa)    
Predicted Functional Partners:
Phatr20135
Predicted protein (690 aa)
     
  0.989
Phatr13053
Predicted protein (725 aa)
     
  0.988
Phatr54743
Predicted protein (347 aa)
       
  0.963
Phatrdraft1638
Predicted protein (548 aa)
       
  0.963
Phatr12309
Predicted protein (134 aa)
     
  0.961
Phatr34280
Predicted protein (238 aa)
     
  0.950
Phatr11593
Predicted protein (324 aa)
     
  0.947
Phatr34712
Predicted protein (662 aa)
       
      0.944
Phatr26061
Predicted protein (552 aa)
     
  0.783
Phatr10122
Predicted protein (324 aa)
     
  0.766
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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