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STRINGSTRING
Phatr41282 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41282" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr41282Predicted protein (173 aa)    
Predicted Functional Partners:
Phatr9894
Predicted protein (140 aa)
   
 
  0.676
Phatr14713
Predicted protein (137 aa)
 
 
  0.675
Phatr10835
Predicted protein; Translation initiation factor IF-2 (579 aa)
 
   
  0.651
Phatr9259
Predicted protein (92 aa)
   
 
  0.638
Phatr13682
Predicted protein (220 aa)
   
 
  0.605
Phatr19103
Predicted protein (102 aa)
   
 
  0.602
Phatr11799
Predicted protein (84 aa)
   
 
  0.602
Phatr44833
Predicted protein (461 aa)
 
 
  0.599
Phatr11189
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (729 aa)
 
 
  0.599
Phatr51291
Predicted protein (121 aa)
   
 
  0.598
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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