STRINGSTRING
Phatr41450 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41450" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr41450Predicted protein (291 aa)    
Predicted Functional Partners:
Phatr50624
Putative uncharacterized protein (603 aa)
       
 
  0.813
Phatr21039
Predicted protein (246 aa)
         
 
0.800
Phatr28743
Predicted protein (203 aa)
       
 
  0.655
Phatr8451
Predicted protein (76 aa)
       
 
  0.654
Phatr47737
Predicted protein (361 aa)
       
 
  0.614
Phatr23959
Predicted protein; Binds the poly(A) tail of mRNA (605 aa)
     
  0.611
Phatr50645
Serine/threonine-protein phosphatase (332 aa)
     
      0.602
Phatr18899
Serine/threonine-protein phosphatase (327 aa)
     
      0.602
Phatr9806
Predicted protein (195 aa)
       
 
  0.560
Phatr8270
Predicted protein (84 aa)
       
 
  0.559
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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