STRINGSTRING
Phatr41608 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41608" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr41608Predicted protein (200 aa)    
Predicted Functional Partners:
Phatr41702
Predicted protein (671 aa)
       
  0.767
Phatr50084
Predicted protein (260 aa)
   
 
  0.640
Phatr14785
Predicted protein (176 aa)
   
 
  0.640
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
   
  0.536
Phatr24739
Predicted protein (1594 aa)
   
   
  0.536
Phatr9246
Predicted protein (258 aa)
   
        0.527
Phatrdraft1682
Anthranilate synthase (927 aa)
         
  0.522
Phatr17238
Anthranilate synthase (958 aa)
         
  0.522
Phatr43169
Predicted protein (404 aa)
     
        0.518
Phatr30466
Predicted protein (361 aa)
     
        0.517
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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