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Phatr41745 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41745" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr41745Predicted protein (351 aa)    
Predicted Functional Partners:
Phatr5145
Predicted protein (226 aa)
 
            0.737
Phatr54528
Enoyl-coa hydratase; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite (385 aa)
     
      0.665
Phatr21557
Predicted protein (348 aa)
     
        0.663
Phatr11740
Predicted protein (229 aa)
     
      0.534
Phatr33692
Predicted protein (515 aa)
     
      0.509
Phatr17414
40S ribosomal protein S8 (205 aa)
   
        0.466
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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