STRINGSTRING
Phatr41778 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41778" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr41778Predicted protein (284 aa)    
Predicted Functional Partners:
RPN3
Regulatory proteasome non-atpase subunit 3 (323 aa)
     
  0.998
RPN7
Regulatory proteasome non-atpase subunit 7 (330 aa)
     
  0.998
Phatr9090
Predicted protein (431 aa)
   
0.998
Phatr45122
Predicted protein (421 aa)
   
0.998
Phatr28219
Predicted protein (447 aa)
   
0.998
Phatr30067
Predicted protein (403 aa)
   
0.998
RPN5
Regulatory proteasome non-atpase subunit 5 (457 aa)
     
  0.995
RPN10
Regulatory proteasome non-atpase subunit 10 (231 aa)
     
  0.995
Phatr29340
Ubiquitin carboxyl-terminal hydrolase (499 aa)
     
  0.993
Phatrdraft611
Predicted protein (130 aa)
     
  0.993
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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