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STRINGSTRING
Phatr41785 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr41785" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr41785Predicted protein; Belongs to the DEAD box helicase family (370 aa)    
Predicted Functional Partners:
Phatr20716
Predicted protein (138 aa)
     
  0.998
Phatr33540
Predicted protein (155 aa)
     
 
  0.995
Phatr11785
Predicted protein (631 aa)
     
 
  0.969
Phatr13192
Predicted protein (74 aa)
     
 
  0.958
Phatr35063
Predicted protein (165 aa)
     
      0.956
Phatr20167
Predicted protein (87 aa)
     
      0.938
Phatrdraft1638
Predicted protein (548 aa)
 
 
 
  0.931
Phatr12161
Predicted protein (250 aa)
     
      0.927
Phatr50132
Predicted protein (1477 aa)
     
 
  0.916
Phatr13095
Predicted protein (97 aa)
     
 
  0.913
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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