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STRINGSTRING
Phatr42129 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr42129" - annotation not available in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr42129annotation not available (479 aa)    
Predicted Functional Partners:
Phatr48952
Predicted protein (791 aa)
     
 
  0.927
Phatr15917
Cystathionine gamma-lyase (392 aa)
     
  0.908
sufS
Cysteine desulfurase for iron-sulfur cluster formation suf (496 aa)
   
 
    0.901
Phatr10257
Predicted protein (459 aa)
     
 
  0.900
Phatr10073
Predicted protein (431 aa)
     
 
  0.900
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
     
 
  0.706
GLRX1
Glutaredoxin (105 aa)
 
 
  0.608
Phatr27240
Predicted protein (746 aa)
     
   
  0.571
Trx-f
Thioredoxin f (107 aa)
   
 
  0.496
Phatr46359
Predicted protein (357 aa)
   
 
  0.496
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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