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Phatr42169 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr42169" - Serine/threonine-protein phosphatase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr42169Serine/threonine-protein phosphatase (315 aa)    
Predicted Functional Partners:
Phatr47992
Predicted protein (432 aa)
   
  0.902
Phatr30334
Predicted protein (645 aa)
     
  0.854
Phatr12174
Predicted protein (585 aa)
     
  0.854
Phatr23164
Predicted protein (489 aa)
     
  0.850
Phatr49932
Predicted protein (1102 aa)
       
 
  0.773
Phatr11741
Predicted protein (422 aa)
       
  0.760
CBP
Calcium binding protein (132 aa)
     
  0.722
CaM2
Calmodulin (154 aa)
     
  0.722
CaM1
Calmoduline (149 aa)
     
  0.722
Phatr21744
Predicted protein (149 aa)
     
  0.722
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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