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Phatr42276 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr42276" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr42276Predicted protein (1263 aa)    
Predicted Functional Partners:
Phatr27240
Predicted protein (746 aa)
       
    0.955
Phatr44775
Predicted protein (580 aa)
       
  0.942
Phatr19513
Predicted protein (717 aa)
       
  0.942
GltD
Synthase of glutamate synthase (580 aa)
       
    0.834
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
 
  0.824
Phatr51092
Glutamine synthetase (416 aa)
       
  0.806
Phatr31906
Aldehyde dehydrogenase (551 aa)
         
  0.804
Phatr13951
Predicted protein (450 aa)
       
    0.801
Phatr45239
Predicted protein (1097 aa)
         
    0.800
GLNA
GLNA, glutamine synthase (716 aa)
         
    0.800
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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