STRINGSTRING
Phatr42282 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr42282" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr42282Predicted protein (383 aa)    
Predicted Functional Partners:
Phatr19901
Predicted protein (900 aa)
 
0.992
Phatr41875
Predicted protein (302 aa)
   
 
  0.914
Phatr20948
Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (104 aa)
     
 
  0.904
Phatr44482
Predicted protein (600 aa)
         
  0.904
Phatr31948
Predicted protein (317 aa)
         
  0.900
Phatr9538
Predicted protein (593 aa)
   
 
  0.890
Phatr12902
Predicted protein (536 aa)
   
 
  0.890
Phatr25956
Predicted protein (272 aa)
   
 
  0.814
Phatr51720
Fumarate reductase flavoprotein (668 aa)
     
  0.810
Phatr12894
Predicted protein (403 aa)
   
 
  0.781
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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