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hCDK2 protein (Phaeodactylum tricornutum) - STRING interaction network
"hCDK2" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hCDK2Predicted protein (347 aa)    
Predicted Functional Partners:
CYCH1
Predicted protein (272 aa)
     
  0.805
Phatr36789
Predicted protein (341 aa)
     
  0.805
CYCL1
Predicted protein (193 aa)
     
  0.702
Phatr10865
Predicted protein (323 aa)
   
 
  0.582
Phatr21821
Predicted protein (311 aa)
   
   
  0.547
Phatr44306
Predicted protein (865 aa)
     
  0.545
Phatr4563
Predicted protein (275 aa)
   
     
  0.521
Phatr18128
Predicted protein (247 aa)
   
   
  0.504
Phatr9491
Predicted protein (163 aa)
   
          0.496
Phatr10291
Predicted protein (303 aa)
   
     
  0.473
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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