STRINGSTRING
CDC6 protein (Phaeodactylum tricornutum) - STRING interaction network
"CDC6" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC6Predicted protein (1107 aa)    
Predicted Functional Partners:
Phatr45115
Predicted protein (1834 aa)
     
0.997
Phatr42935
Predicted protein (588 aa)
     
  0.992
MCM5
Predicted protein (667 aa)
   
  0.992
MCM7
Predicted protein (618 aa)
   
  0.991
MCM3
Predicted protein (551 aa)
   
  0.991
Phatr981
Predicted protein (467 aa)
   
  0.983
MCM2
Predicted protein (808 aa)
   
  0.983
CDKA2
Predicted protein (298 aa)
     
  0.964
Phatr44306
Predicted protein (865 aa)
     
  0.964
hCDK3
Predicted protein (295 aa)
     
  0.964
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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