STRINGSTRING
Phatr42595 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr42595" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr42595Predicted protein (476 aa)    
Predicted Functional Partners:
Skp1_3
S-phase kinase-associated protein (158 aa)
       
  0.693
Skp1;2
Predicted protein (175 aa)
       
  0.693
Skp1_1
Predicted protein (169 aa)
       
  0.693
Phatr16875
Predicted protein (164 aa)
     
  0.649
Phatr6915
Predicted protein (139 aa)
     
  0.638
Phatr44935
Predicted protein (2187 aa)
     
  0.638
Phatr21456
Predicted protein (141 aa)
     
  0.638
Phatr15937
Predicted protein (154 aa)
     
  0.638
Phatr15913
Predicted protein (107 aa)
     
  0.638
H3-1a
Histone H3 (136 aa)
       
  0.619
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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