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STRINGSTRING
Phatr42907 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr42907" - Acyl-coenzyme A dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr42907Acyl-coenzyme A dehydrogenase (443 aa)    
Predicted Functional Partners:
Phatr44982
Predicted protein (203 aa)
   
   
  0.841
Phatr44815
Predicted protein (401 aa)
 
        0.818
KCT1
Beta-ketoacyl-coa thiolase; Belongs to the thiolase family (386 aa)
   
   
  0.722
Phatr11014
Predicted protein (677 aa)
   
   
  0.712
Phatr1690
Predicted protein (495 aa)
         
  0.693
Phatr49570
Predicted protein (326 aa)
   
   
  0.687
Phatr15870
Predicted protein (282 aa)
   
   
  0.676
Phatr5527
Predicted protein (170 aa)
   
   
  0.596
FAO1
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family (767 aa)
   
   
  0.457
Phatr35240
Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (684 aa)
   
   
  0.457
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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