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Phatr42934 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr42934" - Arylsulfatase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr42934Arylsulfatase (564 aa)    
Predicted Functional Partners:
Phatrdraft1393
Predicted protein (518 aa)
 
 
  0.741
cupD
Predicted protein (933 aa)
     
  0.574
Phatr47845
Predicted protein (620 aa)
   
   
0.531
Sit4
Silicon transporter (512 aa)
           
  0.510
Phatr29702
Predicted protein (878 aa)
           
  0.429
Phatr19901
Predicted protein (900 aa)
         
  0.419
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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