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Phatr42962 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr42962" - 2-phosphoglycerate dehydratase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr429622-phosphoglycerate dehydratase (589 aa)    
Predicted Functional Partners:
TIM_1
Triosephosphate isomerase (268 aa)
   
 
  0.940
FbaC1
Fructose-bisphosphate aldolase (402 aa)
   
 
  0.938
Fba3
Cytosolic class II aldolase (400 aa)
   
 
  0.938
FbaC2
Fructose-1,6-bisphosphate aldolase (439 aa)
   
 
  0.938
Fba4
Cytosolic aldolase (299 aa)
         
    0.916
FbaC5
Fructose-bisphosphate aldolase (358 aa)
         
    0.916
Phatr1129
Predicted protein (562 aa)
       
  0.870
Phatr8975
Predicted protein (350 aa)
         
  0.806
Phatr36821
Predicted protein (386 aa)
         
  0.806
GPT1
Glycerol-3-phosphate o-acyltransferase (551 aa)
         
    0.800
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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