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Phatr43018 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43018" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43018Predicted protein (509 aa)    
Predicted Functional Partners:
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
  0.980
Phatr24739
Predicted protein (1594 aa)
   
  0.980
Phatrdraft1610
Predicted protein (279 aa)
       
  0.905
Phatrdraft1259
Predicted protein (279 aa)
       
  0.905
Phatr7342
Predicted protein (106 aa)
       
  0.905
Phatr14478
Predicted protein (112 aa)
       
  0.905
Phatr54983
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.855
Phatr48112
Predicted protein (387 aa)
   
  0.830
Phatr15423
Predicted protein (367 aa)
   
  0.830
Phatr35101
Predicted protein (570 aa)
     
  0.786
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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