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Phatr43019 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43019" - Zw10 like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43019Zw10 like protein (788 aa)    
Predicted Functional Partners:
Phatr43664
Predicted protein (655 aa)
     
  0.657
Pt-BUB3
WD40 mitotic checkpoint-like protein similar to spleen mitotic checkpoint BUB3 (397 aa)
     
 
  0.614
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
       
  0.607
Phatr10954
Predicted protein (209 aa)
       
  0.585
Pt-KIF13
Kinesin family-like protein (138 aa)
         
  0.536
Pt-KIF8
Kinesin family-like protein (280 aa)
         
  0.536
Pt-KIF6
Kinesin family-like protein (320 aa)
         
  0.536
Pt-KiF14
Kinesin family-like protein (375 aa)
         
  0.536
Phatr45416
Predicted protein (632 aa)
         
  0.536
Pt-KIF3
Kinesin family-like protein (953 aa)
         
  0.522
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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