STRINGSTRING
Phatr43038 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43038" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43038Predicted protein (1112 aa)    
Predicted Functional Partners:
Phatr47275
Predicted protein (1055 aa)
     
 
  0.968
Phatr44037
Predicted protein (1291 aa)
     
 
  0.898
Phatr42975
Predicted protein (689 aa)
     
 
  0.823
Phatr43103
Predicted protein (1740 aa)
     
 
  0.811
Phatr45316
Predicted protein (1451 aa)
     
 
  0.790
VPS45
Predicted protein (555 aa)
     
 
  0.742
UNC18
Predicted protein (588 aa)
     
 
  0.694
SLY1
Predicted protein (648 aa)
     
 
  0.682
Phatr45250
Predicted protein (743 aa)
       
      0.648
Phatr14850
Predicted protein (653 aa)
     
   
  0.479
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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