STRINGSTRING
Phatr43105 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43105" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43105Predicted protein (455 aa)    
Predicted Functional Partners:
Phatr12394
Predicted protein (260 aa)
     
 
  0.998
Phatr25133
Predicted protein (562 aa)
     
 
  0.998
Phatr14145
Predicted protein (516 aa)
     
 
  0.998
Phatr2182
Predicted protein (360 aa)
     
 
  0.998
Phatr16814
Predicted protein (662 aa)
     
 
  0.997
Phatr19647
Predicted protein (354 aa)
     
 
  0.997
Phatr45356
Predicted protein (479 aa)
     
 
  0.997
Phatr43447
Predicted protein (671 aa)
     
 
  0.996
Phatr47058
Predicted protein (606 aa)
     
 
  0.996
Phatr32036
Predicted protein (801 aa)
     
 
  0.996
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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