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STRINGSTRING
Phatr43133 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43133" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43133Predicted protein (479 aa)    
Predicted Functional Partners:
CHC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1702 aa)
     
 
  0.986
Phatr36016
Predicted protein (455 aa)
           
  0.882
Phatr7660
Predicted protein (88 aa)
     
 
  0.797
Phatr45826
Predicted protein (238 aa)
       
 
  0.783
Phatr27039
Predicted protein (634 aa)
     
   
  0.776
HSP70A
Protein heat shock protein Hsp70 (653 aa)
       
 
  0.759
HSP70B
Protein heat shock protein (681 aa)
       
 
  0.759
Hsp70_2
Predicted protein; Belongs to the heat shock protein 70 family (646 aa)
       
 
  0.759
Phatr50480
Predicted protein (514 aa)
     
 
  0.724
Hsp70_1
Predicted protein; Belongs to the heat shock protein 70 family (673 aa)
     
 
  0.724
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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