STRINGSTRING
Phatr43140 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43140" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43140Predicted protein (356 aa)    
Predicted Functional Partners:
Phatr11273
Aldehyde reductase (306 aa)
   
   
  0.548
Phatr47510
Predicted protein (381 aa)
   
   
  0.546
Phatr49777
Predicted protein (418 aa)
   
   
  0.545
Phatr44561
Predicted protein (439 aa)
       
      0.452
Phatr42373
Predicted protein (340 aa)
   
   
  0.446
Phatrdraft598
Predicted protein (313 aa)
   
   
  0.446
Phatrdraft1619
Predicted protein (515 aa)
   
   
  0.446
Phatr51714
Reductase with NAD or NADP as acceptor (341 aa)
   
   
  0.446
Phatr51608
2,5-diketo-D-gluconic acid reductase A-like protein (230 aa)
   
   
  0.446
Phatr50252
Predicted protein (479 aa)
   
   
  0.446
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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