STRINGSTRING
Phatr43169 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43169" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43169Predicted protein (404 aa)    
Predicted Functional Partners:
Phatr30466
Predicted protein (361 aa)
   
 
0.757
Phatr11022
Predicted protein (366 aa)
   
        0.632
Phatr41608
Predicted protein (200 aa)
     
        0.518
Phatr21736
Predicted protein (192 aa)
     
        0.518
Phatr12713
Predicted protein (153 aa)
     
        0.518
Phatr9246
Predicted protein (258 aa)
     
        0.505
Phatr48359
Predicted protein (218 aa)
   
        0.504
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
        0.489
Phatr9078
Predicted protein (105 aa)
   
        0.488
Phatr13895
Predicted protein (330 aa)
   
        0.467
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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