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Tpt4 protein (Phaeodactylum tricornutum) - STRING interaction network
"Tpt4" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpt4Predicted protein (367 aa)    
Predicted Functional Partners:
Phatr38686
Predicted protein (386 aa)
     
   
  0.421
Phatr49849
Predicted protein (469 aa)
     
   
  0.415
Phatr46194
Predicted protein (399 aa)
     
   
  0.415
PHATR_4234
Predicted protein (286 aa)
     
   
  0.415
Phatr29042
Predicted protein (385 aa)
     
   
  0.415
Phatr22921
Predicted protein (337 aa)
     
   
  0.415
Phatr22739
Predicted protein (396 aa)
     
   
  0.415
Phatr20120
Predicted protein (339 aa)
     
   
  0.415
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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