STRINGSTRING
Phatr43183 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43183" - Predicted protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43183Predicted protein (508 aa)    
Predicted Functional Partners:
Phatr52174
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1143 aa)
         
  0.632
Phatr13581
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1165 aa)
         
  0.632
Phatr9446
Predicted protein (220 aa)
   
   
  0.599
Phatr1719
Predicted protein (415 aa)
   
   
  0.568
Phatr26780
Predicted protein (516 aa)
   
   
  0.560
Phatr18877
Predicted protein (455 aa)
   
   
  0.560
Phatr14552
Predicted protein (453 aa)
   
   
  0.560
Phatr26256
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity) (526 aa)
   
 
  0.557
Mlh1
Mutl-like protein 1 (695 aa)
         
  0.533
Phatr53969
Predicted protein (1423 aa)
         
  0.533
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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