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Phatr43211 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43211" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43211Predicted protein (826 aa)    
Predicted Functional Partners:
Phatr9806
Predicted protein (195 aa)
     
  0.980
Phatr13192
Predicted protein (74 aa)
     
  0.978
Phatr12161
Predicted protein (250 aa)
       
  0.820
Phatr14572
Predicted protein (219 aa)
       
  0.802
Phatr17408
Predicted protein (1303 aa)
     
  0.778
Phatr49469
Predicted protein (522 aa)
     
  0.768
Phatr51100
Predicted protein (110 aa)
     
  0.761
Phatr13520
Predicted protein (127 aa)
     
  0.753
Phatr35063
Predicted protein (165 aa)
       
  0.752
Phatr33304
Predicted protein (122 aa)
     
  0.749
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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