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STRINGSTRING
Phatr43214 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43214" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43214Predicted protein (1657 aa)    
Predicted Functional Partners:
Phatr41702
Predicted protein (671 aa)
   
   
  0.643
KCT1
Beta-ketoacyl-coa thiolase; Belongs to the thiolase family (386 aa)
   
   
  0.626
AOX1
Precursor of oxidase acyl-coa oxidase; Belongs to the acyl-CoA oxidase family (706 aa)
   
   
  0.618
Phatr44189
Predicted protein (1560 aa)
   
   
  0.607
Phatr45947
Predicted protein; Belongs to the thiolase family (403 aa)
   
   
  0.576
NRPS
Non ribosomal peptide synthase (1367 aa)
   
 
  0.486
Phatr50623
Predicted protein (382 aa)
     
   
  0.470
Phatr49500
Predicted protein (1011 aa)
   
   
  0.461
Phatr11014
Predicted protein (677 aa)
   
   
  0.448
ACD1
Short chain acyl-coenzyme A dehydrogenase (436 aa)
   
   
  0.425
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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