STRINGSTRING
CYCP5 protein (Phaeodactylum tricornutum) - STRING interaction network
"CYCP5" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYCP5Predicted protein (547 aa)    
Predicted Functional Partners:
CDKA2
Predicted protein (298 aa)
       
 
  0.681
CDKA1
Predicted protein (290 aa)
       
 
  0.630
Phatr44306
Predicted protein (865 aa)
       
 
  0.465
hCDK3
Predicted protein (295 aa)
       
 
  0.465
dsCYC6
Predicted protein (362 aa)
           
  0.445
CYCP6
Predicted protein (146 aa)
           
  0.430
dsCYC10
Predicted protein (344 aa)
           
  0.429
dsCYC2
Predicted protein (349 aa)
           
  0.428
CYCP2
Predicted protein (788 aa)
           
  0.412
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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