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Arf1 protein (Phaeodactylum tricornutum) - STRING interaction network
"Arf1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arf1Predicted protein; Belongs to the small GTPase superfamily. Arf family (184 aa)    
Predicted Functional Partners:
Phatr8461
Predicted protein (53 aa)
     
 
  0.934
CHC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1702 aa)
     
 
  0.920
Phatr9123
Predicted protein (52 aa)
       
 
  0.910
Phatr48947
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins (343 aa)
     
 
  0.907
Phatr12431
Predicted protein (801 aa)
       
 
  0.905
Rab6
Predicted protein (236 aa)
     
 
  0.853
Phatr47010
Predicted protein (1133 aa)
     
   
  0.849
Rab11
Predicted protein (214 aa)
   
 
  0.844
SybE
Predicted protein; Belongs to the synaptobrevin family (227 aa)
     
 
  0.842
Phatr8741
Predicted protein (92 aa)
     
 
  0.833
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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