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Phatr43312 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43312" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43312Predicted protein (627 aa)    
Predicted Functional Partners:
Phatr45621
Predicted protein (426 aa)
 
 
0.716
Phatr31878
Predicted protein (157 aa)
 
          0.578
Phatr8828
Predicted protein (291 aa)
         
  0.572
Phatr54983
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.567
FAO1
Peroxisomal bifunctional enzyme (767 aa)
       
  0.552
Phatr35240
Predicted protein (684 aa)
       
  0.552
Phatr47293
Predicted protein (580 aa)
         
  0.549
Phatr51720
Fumarate reductase flavoprotein (668 aa)
         
  0.532
GAPN
Glyceraldehyde-3-phosphate dehydrogenase (588 aa)
         
  0.514
Phatr31906
Aldehyde dehydrogenase (551 aa)
         
  0.514
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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