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Phatr43401 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43401" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43401Predicted protein (564 aa)    
Predicted Functional Partners:
Phatr43913
Predicted protein; Involved in autophagic vesicle formation (330 aa)
       
  0.996
Phatr41667
Autophagy-related protein 3 (302 aa)
     
  0.977
Phatr50303
Predicted protein (124 aa)
       
  0.629
Phatr9342
Predicted protein (382 aa)
         
  0.603
Phatr30282
Predicted protein (341 aa)
     
 
  0.587
Phatr15031
Predicted protein (118 aa)
     
 
  0.587
Phatr49312
Predicted protein (1592 aa)
     
 
  0.586
Phatr49114
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (527 aa)
       
      0.547
Phatr29212
Predicted protein (317 aa)
   
 
      0.523
Phatr18217
Predicted protein (326 aa)
   
          0.523
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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