STRINGSTRING
Phatr43418 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43418" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43418Predicted protein (503 aa)    
Predicted Functional Partners:
Phatr54743
Predicted protein (347 aa)
     
  0.963
Phatrdraft1638
Predicted protein (548 aa)
       
  0.962
Phatr34712
Predicted protein (662 aa)
     
    0.960
Phatr12309
Predicted protein (134 aa)
       
  0.960
Phatr34280
Predicted protein (238 aa)
     
  0.751
Phatr11785
Predicted protein (631 aa)
     
  0.751
Phatr7959
Predicted protein (98 aa)
       
  0.742
Phatr6839
Predicted protein (101 aa)
       
  0.742
Phatr6817
Predicted protein (106 aa)
       
  0.742
Phatr50365
Predicted protein (707 aa)
       
  0.742
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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