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Phatr43429 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43429" - Chorismate synthase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43429Chorismate synthase (442 aa)    
Predicted Functional Partners:
Phatrdraft1682
Anthranilate synthase (927 aa)
   
 
  0.987
EPSPsy
3-phosphoshikimate 1-carboxyvinyltransferase (483 aa)
 
  0.982
Phatr7664
Predicted protein (145 aa)
   
  0.978
Phatrdraft417
Probable chorismate mutase (288 aa)
   
  0.973
Phatr43277
Probable chorismate mutase (299 aa)
   
  0.973
Phatr17238
Anthranilate synthase (958 aa)
   
 
  0.945
AroB
3-dehydroquinate synthase (431 aa)
 
  0.923
Phatr8772
Predicted protein (309 aa)
 
  0.867
Phatr28937
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
   
 
  0.855
Phatr6807
Predicted protein (163 aa)
 
  0.854
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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