STRINGSTRING
Phatr43466 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43466" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43466Predicted protein (487 aa)    
Predicted Functional Partners:
NRPS
Non ribosomal peptide synthase (1367 aa)
     
  0.896
Phatr10852
Predicted protein (167 aa)
     
 
  0.679
Phatr43981
Predicted protein (418 aa)
       
 
  0.612
Phatr33530
Predicted protein (392 aa)
       
 
  0.612
TMT
Tocopherol o-methyltransferase (318 aa)
       
 
  0.612
Phatr10824
Predicted protein (304 aa)
       
 
  0.612
Phatrdraft1610
Predicted protein (279 aa)
     
  0.607
Phatrdraft1259
Predicted protein (279 aa)
     
  0.607
Phatr7342
Predicted protein (106 aa)
     
  0.607
Phatr47958
Predicted protein (312 aa)
     
  0.607
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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