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STRINGSTRING
Phatr43498 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43498" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43498Predicted protein (807 aa)    
Predicted Functional Partners:
Phatr46005
Predicted protein (916 aa)
     
 
  0.993
Phatr44715
Predicted protein (786 aa)
     
 
  0.993
Phatr44776
Predicted protein (851 aa)
     
 
  0.992
Phatr43008
Predicted protein (629 aa)
     
 
  0.985
Phatr43693
Predicted protein (871 aa)
     
 
  0.975
Phatr42749
Predicted protein (1002 aa)
     
 
  0.974
Phatr50446
Predicted protein (1157 aa)
     
   
  0.923
Phatr42274
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi (194 aa)
     
 
  0.918
Phatr14850
Predicted protein (653 aa)
     
 
  0.916
Phatr32759
Predicted protein (879 aa)
     
   
  0.910
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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