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Phatr43504 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43504" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43504Predicted protein (977 aa)    
Predicted Functional Partners:
Phatr47526
Predicted protein (594 aa)
     
 
    0.846
Phatr23838
Predicted protein (1879 aa)
     
 
  0.820
Phatr43105
Predicted protein (455 aa)
     
      0.806
Phatr30365
Predicted protein; Involved in the biogenesis of the 60S ribosomal subunit (677 aa)
     
      0.806
Phatr14145
Predicted protein (516 aa)
     
 
  0.801
Phatr13820
Predicted protein (282 aa)
     
        0.794
Phatr45871
Predicted protein (944 aa)
     
 
    0.769
Phatr43713
Predicted protein (609 aa)
     
 
    0.762
Phatrdraft1637
Predicted protein (1253 aa)
     
 
    0.752
Phatr25666
Predicted protein (885 aa)
     
 
  0.751
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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