STRINGSTRING
Phatr43565 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43565" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43565Predicted protein (358 aa)    
Predicted Functional Partners:
Phatr14572
Predicted protein (219 aa)
       
    0.686
Phatr23164
Predicted protein (489 aa)
     
  0.650
Phatr47737
Predicted protein (361 aa)
     
  0.624
Phatr13095
Predicted protein (97 aa)
     
  0.611
Phatr259
Predicted protein (944 aa)
     
 
  0.600
Phatr42753
Predicted protein (1678 aa)
     
 
  0.599
Phatr33540
Predicted protein (155 aa)
       
  0.565
Phatr9806
Predicted protein (195 aa)
     
  0.500
Phatr10531
Predicted protein (512 aa)
     
 
  0.483
Phatr45989
Predicted protein (1008 aa)
     
 
    0.469
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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