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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr43579 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43579" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43579Predicted protein (701 aa)    
Predicted Functional Partners:
Phatr48855
Predicted protein (903 aa)
     
 
  0.992
Phatr43504
Predicted protein (977 aa)
     
 
  0.880
Phatr29532
Predicted protein (237 aa)
           
  0.846
Phatr12679
Predicted protein (290 aa)
     
        0.595
Phatr43703
Predicted protein (192 aa)
     
        0.588
Phatr49433
Predicted protein (705 aa)
     
        0.553
Phatr18258
Predicted protein (743 aa)
     
   
  0.544
Phatr15233
Predicted protein (151 aa)
     
 
  0.523
Phatr14145
Predicted protein (516 aa)
     
        0.447
Phatr45692
Predicted protein (700 aa)
     
   
  0.443
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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