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Phatr43614 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43614" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43614Predicted protein (363 aa)    
Predicted Functional Partners:
Phatr46142
Predicted protein (512 aa)
     
  0.699
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
 
  0.561
Phatr51040
Predicted protein (607 aa)
     
  0.556
RFC4
Predicted protein (350 aa)
     
  0.501
RFC3
Predicted protein (361 aa)
     
  0.501
RFC2
Predicted protein (349 aa)
     
  0.501
Phatr43994
Predicted protein (942 aa)
     
  0.501
Phatr33013
Predicted protein (571 aa)
     
  0.501
RFC5
Predicted protein (338 aa)
     
  0.501
Rad22
Predicted protein (468 aa)
     
  0.482
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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