STRINGSTRING
Phatr43649 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43649" - Predicted protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43649Predicted protein (775 aa)    
Predicted Functional Partners:
Phatr47020
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (306 aa)
       
  0.976
Phatr19901
Predicted protein (900 aa)
   
  0.946
Phatr9538
Predicted protein (593 aa)
   
  0.923
Phatr12902
Predicted protein (536 aa)
   
  0.923
Phatr12894
Predicted protein (403 aa)
   
 
  0.793
METH
Methionine synthase (1245 aa)
       
  0.752
Phatr25956
Predicted protein (272 aa)
   
 
  0.739
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
   
  0.734
Phatr24739
Predicted protein (1594 aa)
   
   
  0.734
CATR1
Caltractin (151 aa)
       
  0.702
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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