STRINGSTRING
Phatr43708 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43708" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43708Predicted protein (501 aa)    
Predicted Functional Partners:
Phatr41702
Predicted protein (671 aa)
       
      0.928
Phatr45431
Predicted protein (1158 aa)
   
  0.911
Phatr48160
Predicted protein (677 aa)
     
  0.757
Phatr46372
Absent, small, or homeotic discs 2 (687 aa)
       
  0.755
Phatr22868
Predicted protein (551 aa)
     
  0.747
Phatr9860
Predicted protein (318 aa)
     
  0.746
Phatr23077
Predicted protein (379 aa)
     
  0.742
Phatr17300
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes (439 aa)
     
  0.742
Phatr27838
Predicted protein (1040 aa)
     
      0.664
Phatr9278
Predicted protein (294 aa)
   
  0.629
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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