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Phatr43745 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr43745" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr43745Predicted protein (585 aa)    
Predicted Functional Partners:
Phatr9894
Predicted protein (140 aa)
     
      0.683
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (226 aa)
     
 
  0.674
SOD1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (216 aa)
     
 
  0.674
Phatr9411
30S ribosomal protein S15 (78 aa)
     
 
  0.672
Phatr7893
30S ribosomal protein S15 (85 aa)
     
 
  0.672
Phatr9554
Predicted protein (78 aa)
     
      0.668
Phatr54528
Enoyl-coa hydratase; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite (385 aa)
       
      0.661
Phatr19103
Predicted protein (102 aa)
       
      0.661
Phatr29097
Predicted protein (225 aa)
     
      0.635
Phatr51291
Predicted protein (121 aa)
       
 
  0.552
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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